Okay, I'm looking at the article, and it is dated 2006. It was reporting on the very beginning of some research that had not yet been concluded. At that point, they expected it to take another 2 years. This is where critical thinking kicks in. Do you want to take information from research in its infancy, or do you want to take your information from more current data that came after the research was completed?
I will continue to look into it, because as I said, I'm not a genetics expert, but these are red flags that would cause me to look deeper into an issue. I thought the final mapping didn't come until around 2010ish--but not 100% sure.
Another red flag, is that this article is saying that 99% of Neanderthal dna is shared with us, yet native Africans don't have any Neanderthal DNA. European DNA is not 99% different from African DNA, so there is another red flag.